Roger H. Reeves

Research Interests

Molecular genetic basis of and therapies for Down syndrome

Down syndrome (DS) occurs as a result of Trisomy 21 and is among the most complicated genetic conditions compatible with human survival. The Reeves laboratory complements genetic analyses in human beings with the creation and characterization of mouse models to understand why and how gene dosage imbalance disrupts development in DS. The models then provide a basis to explore therapeutic approaches to amelioration of DS features. We use chromosome engineering in ES cells to create defined dosage imbalance in order to localize the genes contributing to these anomalies and to test directly hypotheses concerning Down syndrome “critical regions” on human chromosome 21. Quantitative phenotypic assays that we have developed give a precise and sensitive readout of the relative effects on phenotype when overlapping subsets of genes are at dosage imbalance. Developmental analyses of these traits are underway to identify the timing and location of divergence between trisomic and euploid fetuses. We have used mouse models to:

  1. validate epidemiological findings suggesting a lower incidence of cancer in Down syndrome and to identify the candidate genes (Sussan et al., 2008; Yang and Reeves, 2011 and 2016);
  2. identify direct parallels in the development of the craniofacial skeleton in Down syndrome and trisomic mice (see Hill et al., 2007; Starbuck et al., 2011) and how this is affected by therapies aimed at over-coming Shh response deficits (N. Singh et al., 2015 and 2016);
  3. establish that deficits in cranial neural crest delamination, migration and proliferation are the primary contributors to the hypomorphic craniofacial skeleton (Roper et al., 2009);
  4. identify genetic modifiers of congenital heart disease in the genetically sensitized Down syndrome population with biological validation in animal models (Ramachandran et al., 2014 and 2016; Li, Cherry et al., 2012; Li, Edie et al., 2016);
  5. discover the basis for and potential “treatment” of a fundamental structural deficit in the trisomic brain (Roper et al., 2006; Currier et al., 2012; Das et al. 2013; Dutka et al. 2015) and why some trisomic cells respond less than euploid cells to the mitogenic effects of Shh growth factor.

With fellow PI Stephanie Sherman, we assess genetic contributions to variation in intellectual ability in the Down Syndrome Cognition Project (DS Cognition Project). We use the Arizona Cognitive Test Battery (Edgin et al., 2010) to assess cognitive ability based on functions mapped to different brain regions that are often affected in Down syndrome. Johns Hopkins School of Medicine and the Kennedy Krieger Institute are a site for the ongoing Roche Clinical trial, BP 25543.

Definition of the timing and location of divergence between trisomic and euploid phenotypes and of the gene(s) primarily contributing to those differences provides the necessary basis for genetic, pharmacologic and stem cell therapies to ameliorate these anomalies (Das and Reeves, 2011; Haydar and Reeves, 2012).

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Rajini Rao

Research Interests

Discovery and molecular mechanisms of novel ion transporters.
The Rao laboratory studies the role of novel ion transporters in human health and disease. One project focuses on the calcium signaling in breast cancer. We showed that an isoform of the secretory pathway Ca2+-ATPase, SPCA2, interacts with ion channels to drive tumor proliferation. We are currently investigating how downregulation of SPCA2 promotes epithelial to mesenchymal transition. A second project relates to the endosomal Na+/H+ exchangers NHE6 and NHE9 that are linked to autism, Christianson syndrome, ADHD and a growing list of neurodevelopmental and neurodegenerative disorders. We use a powerful PheWAS approach combined with model structure-driven evolutionary conservation analysis and functional screening of human variants to identify, evaluate and predict causality of autism-associated mutations. Loss of eNHE function results in hyperacidic endosomes, which increases amyloidogenic processing, and turnover of cell surface receptors and neurotransmitter transporters to impact neurotransmitter uptake and synaptic development.  On the other hand, overexpression of NHE9 in glioblastoma confers chemoradiation resistance due to “inside out” control of oncogenic signaling. Our lab also discovered NHA2, an unusual Na+/H+ exchanger that is implicated in essential hypertension and plays a role in salt handling in the kidney. We make extensive use of 3D/organoid cultures, confocal microscopy, live cell calcium and pH imaging, and phenotype complementation in yeast to investigate mammalian transport proteins.

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Zhaozhu Qiu

Research Interests

Osmolarity Sensing 

 Cell is composed of around 70% water with a plasma membrane also permeable to water. So keeping cell volume constant in response to osmotic challenges is fundamental to life. This is achieved in mammals by maintaining a stable blood plasma osmolarity (near 300 mOsm/L) and by possessing a variety of mechanisms that allow individual cells to monitor and recover their volume following osmotic swelling or shrinkage. Defective osmoregulation leads to various human disorders, including dehydration, hypertension, renal and neurological diseases. However, the identity of many key osmosensing molecules has been a long-standing mystery. Our goal is to elucidate the molecular mechanisms of mammalian osmotic regulation at both the cellular and whole body levels. We recently performed a genome-wide RNAi screen and co-discovered SWELL1 (LRRC8A) as an essential component of the elusive Volume-Regulated Anion Channel (VRAC). VRAC is required for maintaining cell volume in response to osmotic swelling. This discovery enables exciting studies elucidating the function of this important channel in cell volume regulation, fluid secretion, and diseases such as diabetes, stroke and traumatic brain injury.

 Deorphanizing the Human Transmembrane Genome: A Focus on Novel Ion Channels   

 The sequencing of the human genome has fueled the last two decades of work to functionally decipher genome content. An important subset (~25%) of genes encodes transmembrane proteins, which represent the targets of over half of known drugs. Despite recent progress, a large number (~1,500) of membrane proteins are still functionally uncharacterized. We focus on deorphanizing a particularly interesting functional class of membrane proteins, i.e. ion channels or transporters, many of which are well characterized biophysically yet lack underlying molecular identity. Toward this end, we are combining the powerful genomics tools (including bioinformatics, proteomics, single-cell RNA sequencing, and RNAi/CRISPR gene manipulation) with electrophysiology and imaging techniques. Our study will shed light on the molecular identity and physiological function of new pore-forming membrane proteins and may provide therapeutic strategies to target them for diseases with abnormal ion transport and homeostasis. 

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Jennifer Pluznick

Research Interests

Elucidating the role of sensory receptors (olfactory receptors and other sensory GPCRs) in regulating renal and cardiovascular function; elucidating the role of the gut microbiota in renal and cardiovascular function

Our lab is interested in the role that chemosensation plays in regulating physiological processes, particularly in the kidney and the cardiovascular system. We have found that sensory receptors (olfactory receptors, taste receptors, and other G-protein coupled receptors) are expressed in the kidney and in blood vessels, and that individual receptors play functional roles in whole-animal physiology.  We are working to understand the role that each receptor plays in whole-animal physiology by using a variety of in vitro (receptor localization, ligand screening) and in vivo (whole-animal physiology) techniques.  We have found that two renal/cardiovascular sensory receptors modulate blood pressure regulation in response to changes in gut microbial metabolites; thus, we also exploring the interplay of sensory receptors, the gut microbiota, and blood pressure regulation.

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